Research Areas

Applied Genomics

  • Applications of genomic information into the pre-breeding effort, including genetic diversity assessment, frequency of disease-resistance QTL in germplasm, genomic selection, and all applications of incorporating genetic relatedness into practical breeding strategies.
  • Genome-wide association studies for traits of interest using diversity panel, bi-parental, and self populations of genotypes.

Charts comparing breeding methods and stalk counts per plot to illustrate genetic gains over multiple selection stages.


Phenomics

  • Statistical and machine learning modeling and predictions for genetic value comparisons between varieties
  • Analysis of breeding trial data for crossing, pre-breeding/parent population development, and selection of elite genotypes
  • Assessments of High-Throughput Phenotyping technologies for their ability to detect varietal differences and estimate traits of interest for the breeding trials
    • UAV-generated image data and indices to estimate agronomic performance
    • Development of in-field implements for ground-based phenotyping using RGB and LiDAR sensors
  • Development and validation of ratoon ability indices for selection.

Slide showing UAV imagery and data plots demonstrating high-throughput phenotyping to identify superior crop varieties.

Concept-to-field example of precision agriculture equipment and image analysis used for high-throughput phenotyping in crops.


Enviromics

  • Determination of environmental causal agents of genotype-by-environment interactions in sugarcane breeding trials
  • Defining a target population of environments for efficient testing in representative locations of the Louisiana production zone
  • Incorporating envirotyping techniques to model genotype-by-environment interactions and increase selection accuracy for broadly adapted genotypes
  • Trait-targeted nurseries in three representative locations of the LA production zone for increased ratoon ability and fitness for expanded areas of commercial production.
  • Germplasm assessment for cold tolerance.

Map of Louisiana showing sugar yield variation with charts highlighting performance under cold tolerance and heavy soil conditions.

Germplasm Improvement

  • Development of breeding tools for crossing, selection, tracking historical pedigrees, and data management
  • Quantifying genetic gains within and across selection stages and cycles

SucroX application home screen showing today’s Julian date, with buttons for tassel survey, cross selections, and file drop.

CaneCestry application screen with options for generating kinship matrices, exploring pedigrees, and adding pedigree entries.


Conference Presentations

“AI in Agroecosystems: Incorporating AI Into the LSU AgCenter Sugarcane Breeding Program.” B. Blanchard et al. 2023 AI in Agroecosystems – Baton Rouge, LA. Host and Guest Speaker.

“Genomic Selection at the LSU AgCenter Sugar Research Station: Where and How is it Working?” B. Blanchard. 2025 Sugar Association of the Caribbean Group Tour – St. Gabriel, LA. Host and Presenter.

American Society of Sugar Cane Technologists Annual Joint Meetings.

“What is Influencing Our Genetic Values?: A Full Breeding Program Evaluation.” B. Blanchard. 2025 – Charlotte Harbor, FL. Awarded 1st place presenter.

“Precision Sugarcane Breeding: Driving Genetic Gains Through Multi-Omics Strategies.” B. Blanchard. 2025 – Baton Rouge, LA.

“Optimizing Sugarcane Breeding with R and Python: An Interactive and Improved Database for Daily Crossing Decisions.” B. Blanchard et al. 2023 – Savannah, GA.

“The Dynamics of Using New Versus Old Parents in the Louisiana State University Agricultural Center Sugarcane Breeding and Selection Program.” B. Blanchard et al. 2022 – Bonita Springs, FL.

“Predicting Progeny Performance for Sucrose Content in the Early Clonal Stage Using Parent Value from Variety Performance Trials.” B. Blanchard et al. 2021 – Virtual.

“Can Florida Sugarcane Varieties Benefit the Louisiana Sugar Industry?” B. Blanchard and K. Gravois. Awarded 1st place presenter. 2019 – Mobile, Alabama.

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